#------------------------------------------------------------------------------ #$Date: 2016-03-26 22:31:53 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180509 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/78/7217879.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7217879 loop_ _publ_author_name 'Wang, Liqun' 'Zhang, Daming' 'li, jian' 'Xu, Guangyang' 'Sun, Jiangtao' _publ_section_title ; A Highly Efficient DBU-Catalyzed Green Synthesis of Spirooxindoles ; _journal_name_full 'RSC Adv.' _journal_paper_doi 10.1039/C4RA08812C _journal_year 2014 _chemical_formula_sum 'C18 H19 Cl N2 O5 S' _chemical_formula_weight 410.86 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.454(10) _cell_angle_beta 99.008(10) _cell_angle_gamma 103.693(10) _cell_formula_units_Z 2 _cell_length_a 6.712(3) _cell_length_b 11.442(5) _cell_length_c 13.092(6) _cell_measurement_reflns_used 1484 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 23.40 _cell_measurement_theta_min 3.15 _cell_volume 963.8(7) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.990 _diffrn_measured_fraction_theta_max 0.990 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0234 _diffrn_reflns_av_sigmaI/netI 0.0482 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 5420 _diffrn_reflns_theta_full 24.98 _diffrn_reflns_theta_max 24.98 _diffrn_reflns_theta_min 1.58 _exptl_absorpt_coefficient_mu 0.338 _exptl_absorpt_correction_T_max 0.9262 _exptl_absorpt_correction_T_min 0.9112 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.416 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 428 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.23 _refine_diff_density_max 0.488 _refine_diff_density_min -0.601 _refine_diff_density_rms 0.121 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.035 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 247 _refine_ls_number_reflns 3351 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.035 _refine_ls_R_factor_all 0.0953 _refine_ls_R_factor_gt 0.0653 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1200P)^2^+1.5200P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1763 _refine_ls_wR_factor_ref 0.2281 _reflns_number_gt 2416 _reflns_number_total 3351 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c4ra08812c2.cif _cod_data_source_block 130603d _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_refine_ls_hydrogen_treatment' value 'CONSTR' changed to 'constr' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_original_cell_volume 963.7(7) _cod_original_sg_symbol_H-M P-1 _cod_database_code 7217879 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S1 S 1.23089(17) 0.24324(11) 0.41818(10) 0.0482(4) Uani 1 1 d . Cl1 Cl 0.7941(4) 0.51385(15) 0.10483(13) 0.0976(7) Uani 1 1 d . O5 O 0.7508(5) 0.1187(3) 0.5579(2) 0.0436(8) Uani 1 1 d . O4 O 0.5189(5) -0.1717(3) 0.2297(2) 0.0505(8) Uani 1 1 d . O1 O 0.6487(6) 0.0769(3) 0.1523(3) 0.0600(10) Uani 1 1 d . O2 O 0.3587(6) 0.0873(4) 0.2102(3) 0.0724(12) Uani 1 1 d . O3 O 0.8518(6) -0.1544(4) 0.2192(4) 0.0897(16) Uani 1 1 d . N1 N 0.7513(5) 0.3101(3) 0.5092(3) 0.0343(8) Uani 1 1 d . N2 N 0.9713(5) 0.0325(3) 0.3657(3) 0.0414(9) Uani 1 1 d . H2 H 1.0723 -0.0014 0.3639 0.050 Uiso 1 1 calc R C6 C 0.7814(6) 0.2976(3) 0.3388(3) 0.0295(8) Uani 1 1 d . C11 C 0.6315(6) 0.0617(3) 0.3323(3) 0.0321(9) Uani 1 1 d . H11 H 0.5149 0.0426 0.3709 0.039 Uiso 1 1 calc R C10 C 0.7577(7) -0.0370(4) 0.3461(3) 0.0369(10) Uani 1 1 d . H10 H 0.7271 -0.0806 0.4081 0.044 Uiso 1 1 calc R C8 C 0.7615(6) 0.1942(4) 0.4947(3) 0.0311(9) Uani 1 1 d . C5 C 0.7589(6) 0.3720(4) 0.4174(3) 0.0328(9) Uani 1 1 d . C7 C 0.7936(6) 0.1770(3) 0.3810(3) 0.0286(8) Uani 1 1 d . C9 C 1.0059(6) 0.1473(4) 0.3860(3) 0.0320(9) Uani 1 1 d . C1 C 0.7994(7) 0.3418(4) 0.2424(3) 0.0419(10) Uani 1 1 d . H1 H 0.8212 0.2943 0.1892 0.050 Uiso 1 1 calc R C15 C 0.7198(8) -0.1267(4) 0.2566(4) 0.0471(11) Uani 1 1 d . C12 C 0.5540(7) 0.0764(4) 0.2197(3) 0.0424(11) Uani 1 1 d . C18 C 0.7128(8) 0.3563(5) 0.6058(4) 0.0482(12) Uani 1 1 d . H18A H 0.5699 0.3600 0.5989 0.072 Uiso 1 1 calc R H18B H 0.8009 0.4355 0.6224 0.072 Uiso 1 1 calc R H18C H 0.7419 0.3039 0.6601 0.072 Uiso 1 1 calc R C4 C 0.7495(7) 0.4894(4) 0.4027(4) 0.0432(11) Uani 1 1 d . H4 H 0.7371 0.5389 0.4569 0.052 Uiso 1 1 calc R C2 C 0.7842(9) 0.4586(4) 0.2269(4) 0.0526(12) Uani 1 1 d . C3 C 0.7590(8) 0.5308(4) 0.3059(4) 0.0543(13) Uani 1 1 d . H3 H 0.7482 0.6091 0.2930 0.065 Uiso 1 1 calc R C16 C 0.4469(10) -0.2568(6) 0.1411(5) 0.0779(19) Uani 1 1 d . H16A H 0.5521 -0.2470 0.0967 0.093 Uiso 1 1 calc R H16B H 0.4212 -0.3385 0.1643 0.093 Uiso 1 1 calc R C14 C 0.2329(16) 0.2225(10) 0.0978(7) 0.130(4) Uani 1 1 d . H14A H 0.1635 0.2433 0.1515 0.195 Uiso 1 1 calc R H14B H 0.1532 0.2294 0.0315 0.195 Uiso 1 1 calc R H14C H 0.3683 0.2761 0.1034 0.195 Uiso 1 1 calc R C13 C 0.2526(15) 0.1058(9) 0.1077(6) 0.126(4) Uani 1 1 d . H13A H 0.3299 0.0867 0.0558 0.151 Uiso 1 1 calc R H13B H 0.1156 0.0513 0.0952 0.151 Uiso 1 1 calc R C17 C 0.2607(12) -0.2353(8) 0.0853(6) 0.111(3) Uani 1 1 d . H17A H 0.1725 -0.2220 0.1330 0.166 Uiso 1 1 calc R H17B H 0.1902 -0.3039 0.0399 0.166 Uiso 1 1 calc R H17C H 0.2938 -0.1655 0.0452 0.166 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0308(6) 0.0450(7) 0.0648(8) -0.0140(6) 0.0018(5) 0.0055(5) Cl1 0.179(2) 0.0559(9) 0.0699(10) 0.0343(8) 0.0405(11) 0.0386(11) O5 0.0539(19) 0.0458(18) 0.0364(16) 0.0079(14) 0.0091(14) 0.0212(15) O4 0.0490(19) 0.0442(18) 0.0483(19) -0.0132(14) 0.0016(15) -0.0039(15) O1 0.084(3) 0.059(2) 0.0341(18) 0.0055(15) 0.0099(18) 0.0114(19) O2 0.065(2) 0.099(3) 0.055(2) -0.010(2) -0.0244(19) 0.047(2) O3 0.061(3) 0.082(3) 0.126(4) -0.054(3) 0.002(2) 0.027(2) N1 0.0329(18) 0.0370(19) 0.0340(18) -0.0060(14) 0.0050(14) 0.0113(15) N2 0.0349(19) 0.035(2) 0.055(2) -0.0057(16) -0.0055(16) 0.0179(15) C6 0.0260(19) 0.027(2) 0.036(2) 0.0022(16) 0.0067(16) 0.0069(15) C11 0.035(2) 0.031(2) 0.031(2) 0.0013(16) 0.0005(16) 0.0127(17) C10 0.042(2) 0.025(2) 0.042(2) 0.0013(17) -0.0040(18) 0.0110(17) C8 0.0236(19) 0.039(2) 0.031(2) 0.0011(17) 0.0029(15) 0.0085(16) C5 0.0245(19) 0.032(2) 0.042(2) -0.0007(17) 0.0024(16) 0.0091(16) C7 0.0291(19) 0.030(2) 0.0286(19) 0.0016(15) 0.0028(15) 0.0122(16) C9 0.032(2) 0.034(2) 0.031(2) -0.0014(16) 0.0013(16) 0.0123(17) C1 0.054(3) 0.032(2) 0.043(2) 0.0041(18) 0.013(2) 0.013(2) C15 0.049(3) 0.040(3) 0.054(3) -0.004(2) 0.002(2) 0.019(2) C12 0.057(3) 0.035(2) 0.032(2) -0.0013(18) -0.008(2) 0.014(2) C18 0.049(3) 0.055(3) 0.043(3) -0.015(2) 0.010(2) 0.016(2) C4 0.041(2) 0.031(2) 0.058(3) -0.004(2) 0.009(2) 0.0092(18) C2 0.070(3) 0.040(3) 0.050(3) 0.013(2) 0.010(2) 0.017(2) C3 0.067(3) 0.028(2) 0.071(3) 0.007(2) 0.005(3) 0.020(2) C16 0.077(4) 0.076(4) 0.071(4) -0.043(3) -0.012(3) 0.017(3) C14 0.147(8) 0.185(10) 0.095(6) 0.061(6) 0.026(6) 0.108(8) C13 0.139(8) 0.158(9) 0.081(5) -0.005(5) -0.059(5) 0.087(7) C17 0.097(6) 0.141(8) 0.080(5) -0.052(5) -0.026(4) 0.029(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C15 O4 C16 118.6(4) C12 O2 C13 118.5(6) C8 N1 C5 111.6(3) C8 N1 C18 122.4(4) C5 N1 C18 125.6(4) C9 N2 C10 118.0(3) C9 N2 H2 121.0 C10 N2 H2 121.0 C1 C6 C5 119.6(4) C1 C6 C7 131.3(4) C5 C6 C7 109.0(3) C12 C11 C7 111.1(3) C12 C11 C10 111.8(3) C7 C11 C10 102.8(3) C12 C11 H11 110.3 C7 C11 H11 110.3 C10 C11 H11 110.3 N2 C10 C15 111.6(4) N2 C10 C11 103.2(3) C15 C10 C11 115.9(3) N2 C10 H10 108.6 C15 C10 H10 108.6 C11 C10 H10 108.6 O5 C8 N1 126.7(4) O5 C8 C7 125.8(4) N1 C8 C7 107.5(3) C4 C5 C6 122.3(4) C4 C5 N1 127.7(4) C6 C5 N1 110.0(3) C6 C7 C9 114.9(3) C6 C7 C8 101.7(3) C9 C7 C8 106.7(3) C6 C7 C11 119.4(3) C9 C7 C11 105.4(3) C8 C7 C11 107.9(3) N2 C9 C7 107.1(3) N2 C9 S1 127.5(3) C7 C9 S1 125.3(3) C6 C1 C2 118.1(4) C6 C1 H1 121.0 C2 C1 H1 121.0 O3 C15 O4 126.0(5) O3 C15 C10 124.6(5) O4 C15 C10 109.4(4) O1 C12 O2 125.8(4) O1 C12 C11 125.5(4) O2 C12 C11 108.7(4) N1 C18 H18A 109.5 N1 C18 H18B 109.5 H18A C18 H18B 109.5 N1 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C3 C4 C5 117.6(4) C3 C4 H4 121.2 C5 C4 H4 121.2 C3 C2 C1 121.4(4) C3 C2 Cl1 119.7(4) C1 C2 Cl1 118.8(4) C4 C3 C2 121.0(4) C4 C3 H3 119.5 C2 C3 H3 119.5 C17 C16 O4 108.9(5) C17 C16 H16A 109.9 O4 C16 H16A 109.9 C17 C16 H16B 109.9 O4 C16 H16B 109.9 H16A C16 H16B 108.3 C13 C14 H14A 109.5 C13 C14 H14B 109.5 H14A C14 H14B 109.5 C13 C14 H14C 109.5 H14A C14 H14C 109.5 H14B C14 H14C 109.5 C14 C13 O2 112.0(7) C14 C13 H13A 109.2 O2 C13 H13A 109.2 C14 C13 H13B 109.2 O2 C13 H13B 109.2 H13A C13 H13B 107.9 C16 C17 H17A 109.5 C16 C17 H17B 109.5 H17A C17 H17B 109.5 C16 C17 H17C 109.5 H17A C17 H17C 109.5 H17B C17 H17C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 C9 1.634(4) Cl1 C2 1.729(5) O5 C8 1.199(5) O4 C15 1.314(6) O4 C16 1.453(6) O1 C12 1.165(6) O2 C12 1.332(6) O2 C13 1.459(7) O3 C15 1.179(6) N1 C8 1.357(5) N1 C5 1.401(5) N1 C18 1.450(5) N2 C9 1.297(5) N2 C10 1.448(5) N2 H2 0.8600 C6 C1 1.376(6) C6 C5 1.380(6) C6 C7 1.505(5) C11 C12 1.510(6) C11 C7 1.556(5) C11 C10 1.559(5) C11 H11 0.9800 C10 C15 1.502(6) C10 H10 0.9800 C8 C7 1.554(5) C5 C4 1.374(6) C7 C9 1.533(5) C1 C2 1.379(6) C1 H1 0.9300 C18 H18A 0.9600 C18 H18B 0.9600 C18 H18C 0.9600 C4 C3 1.363(7) C4 H4 0.9300 C2 C3 1.374(7) C3 H3 0.9300 C16 C17 1.420(9) C16 H16A 0.9700 C16 H16B 0.9700 C14 C13 1.378(12) C14 H14A 0.9600 C14 H14B 0.9600 C14 H14C 0.9600 C13 H13A 0.9700 C13 H13B 0.9700 C17 H17A 0.9600 C17 H17B 0.9600 C17 H17C 0.9600 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C9 N2 C10 C15 137.5(4) C9 N2 C10 C11 12.4(5) C12 C11 C10 N2 101.8(4) C7 C11 C10 N2 -17.5(4) C12 C11 C10 C15 -20.5(5) C7 C11 C10 C15 -139.8(4) C5 N1 C8 O5 -177.0(4) C18 N1 C8 O5 -3.7(6) C5 N1 C8 C7 3.9(4) C18 N1 C8 C7 177.2(3) C1 C6 C5 C4 1.3(6) C7 C6 C5 C4 178.1(4) C1 C6 C5 N1 -177.8(4) C7 C6 C5 N1 -1.0(4) C8 N1 C5 C4 179.1(4) C18 N1 C5 C4 6.0(7) C8 N1 C5 C6 -1.9(4) C18 N1 C5 C6 -175.0(4) C1 C6 C7 C9 64.5(6) C5 C6 C7 C9 -111.8(4) C1 C6 C7 C8 179.3(4) C5 C6 C7 C8 3.1(4) C1 C6 C7 C11 -62.2(6) C5 C6 C7 C11 121.5(4) O5 C8 C7 C6 176.8(4) N1 C8 C7 C6 -4.2(4) O5 C8 C7 C9 -62.5(5) N1 C8 C7 C9 116.6(3) O5 C8 C7 C11 50.3(5) N1 C8 C7 C11 -130.6(3) C12 C11 C7 C6 28.7(5) C10 C11 C7 C6 148.5(3) C12 C11 C7 C9 -102.3(4) C10 C11 C7 C9 17.5(4) C12 C11 C7 C8 144.0(3) C10 C11 C7 C8 -96.3(3) C10 N2 C9 C7 -0.9(5) C10 N2 C9 S1 175.6(3) C6 C7 C9 N2 -144.7(4) C8 C7 C9 N2 103.4(4) C11 C7 C9 N2 -11.1(4) C6 C7 C9 S1 38.7(5) C8 C7 C9 S1 -73.2(4) C11 C7 C9 S1 172.3(3) C5 C6 C1 C2 -3.0(6) C7 C6 C1 C2 -178.9(4) C16 O4 C15 O3 -5.1(8) C16 O4 C15 C10 177.2(5) N2 C10 C15 O3 13.6(7) C11 C10 C15 O3 131.4(6) N2 C10 C15 O4 -168.6(4) C11 C10 C15 O4 -50.9(5) C13 O2 C12 O1 -2.3(8) C13 O2 C12 C11 178.4(6) C7 C11 C12 O1 72.6(5) C10 C11 C12 O1 -41.7(6) C7 C11 C12 O2 -108.2(4) C10 C11 C12 O2 137.6(4) C6 C5 C4 C3 1.3(6) N1 C5 C4 C3 -179.8(4) C6 C1 C2 C3 2.2(8) C6 C1 C2 Cl1 -177.0(4) C5 C4 C3 C2 -2.2(7) C1 C2 C3 C4 0.4(8) Cl1 C2 C3 C4 179.6(4) C15 O4 C16 C17 -142.3(6) C12 O2 C13 C14 -106.2(8)