#------------------------------------------------------------------------------ #$Date: 2020-10-02 17:43:13 +0300 (Fri, 02 Oct 2020) $ #$Revision: 256941 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/50/15/1501550.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1501550 loop_ _publ_author_name 'Adam Duong' 'Marc-Andr\'e Dubois' 'Thierry Maris' 'Val\'erie M\'etivaud' 'Ji-Hyun Yi' 'Antonio Nanci' 'Alain Rochefort' 'Wuest,James D' _publ_section_title ; Engineering Homologous Molecular Organization in 2D and 3D. Cocrystallization of Pyridyl-Substituted Diaminotriazines with Alkanecarboxylic Acids ; _journal_name_full 'The Journal of Physical Chemistry C' _journal_page_first 12908 _journal_page_last 12919 _journal_paper_doi 10.1021/jp201119g _journal_volume 115 _journal_year 2011 _chemical_compound_source 'Synthesized by the authors. See text' _chemical_formula_moiety 'C8 H16 O2, C8 H8 N6' _chemical_formula_sum 'C16 H24 N6 O2' _chemical_formula_weight 332.41 _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 104.685(2) _cell_angle_beta 90.861(2) _cell_angle_gamma 98.832(3) _cell_formula_units_Z 2 _cell_length_a 8.8653(4) _cell_length_b 9.4282(4) _cell_length_c 10.7014(5) _cell_measurement_reflns_used 8454 _cell_measurement_temperature 150 _cell_measurement_theta_max 69.07 _cell_measurement_theta_min 4.28 _cell_volume 853.62(7) _computing_cell_refinement 'SAINT V7.68A(Bruker AXS, 2009)' _computing_data_collection 'APEX2 (Bruker AXS, 2009)' _computing_data_reduction 'SAINT V7.68A(Bruker AXS, 2009)' _computing_molecular_graphics 'SHELXTL v6.12 (Bruker AXS, 2001)' _computing_publication_material 'UdMX (Maris, 2004)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SIR2004 (Burla et al., 2004)' _diffrn_ambient_temperature 150 _diffrn_detector_area_resol_mean 8.3 _diffrn_measured_fraction_theta_full 0.974 _diffrn_measured_fraction_theta_max 0.974 _diffrn_measurement_device_type 'Bruker Microstar' _diffrn_measurement_method \w _diffrn_radiation_monochromator 'Helios optics' _diffrn_radiation_source 'Rotating Anode' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.036 _diffrn_reflns_av_sigmaI/netI 0.0411 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 14242 _diffrn_reflns_theta_full 69.30 _diffrn_reflns_theta_max 69.30 _diffrn_reflns_theta_min 4.28 _exptl_absorpt_coefficient_mu 0.726 _exptl_absorpt_correction_T_max 0.9785 _exptl_absorpt_correction_T_min 0.6001 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'Sadabs (Sheldrick, 2008)' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.293 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 356 _exptl_crystal_size_max 0.12 _exptl_crystal_size_mid 0.09 _exptl_crystal_size_min 0.03 _refine_diff_density_max 0.555 _refine_diff_density_min -0.361 _refine_diff_density_rms 0.099 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.069 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 218 _refine_ls_number_reflns 3105 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.069 _refine_ls_R_factor_all 0.0744 _refine_ls_R_factor_gt 0.0701 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1539P)^2^+0.1124P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1849 _refine_ls_wR_factor_ref 0.1955 _reflns_number_gt 2749 _reflns_number_total 3105 _reflns_threshold_expression I>2\s(I) _cod_data_source_file deposit.cif _cod_data_source_block adam55 _cod_depositor_comments ; Updated values of the _geom_bond_atom_site_label_* data items to establish relationships between loop packets from different data loops. Antanas Vaitkus, 2020-10-02 ; _cod_original_sg_symbol_H-M P-1 _cod_database_code 1501550 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.47582(15) 1.31235(14) 1.01988(13) 0.0426(4) Uani 1 1 d . O2 O 0.42854(14) 1.13557(14) 0.83620(13) 0.0402(4) Uani 1 1 d . H2 H 0.3508 1.1755 0.8322 0.060 Uiso 1 1 calc . C1 C 0.51109(18) 1.20558(18) 0.94235(16) 0.0279(4) Uani 1 1 d . C2 C 0.65414(18) 1.14146(18) 0.96042(16) 0.0291(4) Uani 1 1 d . H2A H 0.6486 1.1093 1.0416 0.035 Uiso 1 1 calc R H2B H 0.7436 1.2213 0.9709 0.035 Uiso 1 1 calc R C3 C 0.68088(18) 1.01053(17) 0.85080(16) 0.0277(4) Uani 1 1 d . H3A H 0.6833 1.0406 0.7686 0.033 Uiso 1 1 calc R H3B H 0.5944 0.9281 0.8425 0.033 Uiso 1 1 calc R C4 C 0.83007(18) 0.95527(18) 0.87244(16) 0.0296(4) Uani 1 1 d . H4A H 0.9155 1.0399 0.8894 0.035 Uiso 1 1 calc R H4B H 0.8236 0.9156 0.9498 0.035 Uiso 1 1 calc R C5 C 0.86370(19) 0.83468(18) 0.75664(17) 0.0311(4) Uani 1 1 d . H5A H 0.8678 0.8742 0.6792 0.037 Uiso 1 1 calc R H5B H 0.7786 0.7498 0.7408 0.037 Uiso 1 1 calc R C6 C 1.01377(19) 0.7785(2) 0.77407(17) 0.0324(4) Uani 1 1 d . H6A H 1.0976 0.8646 0.7981 0.039 Uiso 1 1 calc R H6B H 1.0060 0.7303 0.8464 0.039 Uiso 1 1 calc R C7 C 1.0542(2) 0.6686(2) 0.65373(18) 0.0354(4) Uani 1 1 d . H7A H 1.0548 0.7139 0.5798 0.042 Uiso 1 1 calc R H7B H 0.9745 0.5789 0.6334 0.042 Uiso 1 1 calc R C8 C 1.2093(2) 0.6227(2) 0.6697(2) 0.0456(5) Uani 1 1 d . H8A H 1.2889 0.7108 0.6886 0.068 Uiso 1 1 calc R H8B H 1.2302 0.5526 0.5897 0.068 Uiso 1 1 calc R H8C H 1.2085 0.5751 0.7413 0.068 Uiso 1 1 calc R C9 C -0.46436(18) 1.20357(18) 0.53206(16) 0.0291(4) Uani 1 1 d . H9 H -0.5197 1.1266 0.4647 0.035 Uiso 1 1 calc R C10 C -0.53069(19) 1.32911(18) 0.58261(18) 0.0306(4) Uani 1 1 d . H10 H -0.6288 1.3371 0.5509 0.037 Uiso 1 1 calc R C11 C -0.45003(19) 1.44185(18) 0.68024(17) 0.0313(4) Uani 1 1 d . H11 H -0.4917 1.5292 0.7171 0.038 Uiso 1 1 calc R C12 C -0.30684(18) 1.42488(17) 0.72335(16) 0.0270(4) Uani 1 1 d . H12 H -0.2485 1.5009 0.7897 0.032 Uiso 1 1 calc R C13 C -0.25027(17) 1.29500(16) 0.66789(15) 0.0223(4) Uani 1 1 d . C14 C -0.09605(17) 1.27237(16) 0.71168(15) 0.0219(4) Uani 1 1 d . C15 C 0.10723(17) 1.33944(16) 0.85722(15) 0.0235(4) Uani 1 1 d . C16 C 0.10658(17) 1.15036(16) 0.67531(15) 0.0229(4) Uani 1 1 d . N1 N -0.32752(15) 1.18515(14) 0.57283(13) 0.0257(4) Uani 1 1 d . N2 N -0.03467(15) 1.36146(14) 0.82448(13) 0.0235(3) Uani 1 1 d . N3 N 0.18020(14) 1.23497(14) 0.78552(13) 0.0256(4) Uani 1 1 d . N4 N -0.03362(14) 1.16591(13) 0.63290(13) 0.0234(3) Uani 1 1 d . N5 N 0.18004(15) 1.42551(15) 0.96535(13) 0.0303(4) Uani 1 1 d . H5C H 0.2721 1.4128 0.9874 0.036 Uiso 1 1 calc . H5D H 0.1363 1.4953 1.0152 0.036 Uiso 1 1 calc . N6 N 0.17546(15) 1.04545(15) 0.60301(13) 0.0283(4) Uani 1 1 d . H6C H 0.2665 1.0333 0.6281 0.034 Uiso 1 1 calc . H6D H 0.1300 0.9880 0.5300 0.034 Uiso 1 1 calc . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0400(7) 0.0419(7) 0.0410(8) -0.0084(6) -0.0075(6) 0.0245(6) O2 0.0345(7) 0.0444(7) 0.0373(7) -0.0073(6) -0.0089(5) 0.0245(6) C1 0.0243(8) 0.0292(8) 0.0307(8) 0.0057(6) 0.0010(6) 0.0093(6) C2 0.0233(8) 0.0332(8) 0.0317(8) 0.0059(7) -0.0007(6) 0.0120(7) C3 0.0229(8) 0.0292(8) 0.0331(9) 0.0082(7) 0.0012(6) 0.0103(6) C4 0.0248(8) 0.0333(8) 0.0332(9) 0.0080(7) 0.0027(6) 0.0135(7) C5 0.0277(8) 0.0305(8) 0.0373(9) 0.0080(7) 0.0013(7) 0.0124(7) C6 0.0288(9) 0.0372(9) 0.0360(9) 0.0114(7) 0.0064(7) 0.0168(7) C7 0.0357(9) 0.0353(9) 0.0394(10) 0.0096(7) 0.0085(7) 0.0182(7) C8 0.0427(11) 0.0544(11) 0.0520(12) 0.0214(9) 0.0188(9) 0.0312(9) C9 0.0235(8) 0.0293(8) 0.0317(8) 0.0009(6) -0.0020(6) 0.0078(6) C10 0.0224(8) 0.0327(8) 0.0375(9) 0.0061(7) -0.0008(7) 0.0123(7) C11 0.0297(9) 0.0290(8) 0.0351(9) 0.0019(7) 0.0011(7) 0.0160(7) C12 0.0270(8) 0.0256(8) 0.0271(8) 0.0004(6) 0.0004(6) 0.0113(6) C13 0.0218(8) 0.0231(7) 0.0224(7) 0.0037(6) 0.0032(6) 0.0087(6) C14 0.0216(8) 0.0198(7) 0.0239(7) 0.0025(6) 0.0024(6) 0.0071(6) C15 0.0215(7) 0.0238(7) 0.0248(8) 0.0023(6) 0.0025(6) 0.0092(6) C16 0.0206(7) 0.0236(7) 0.0238(8) 0.0019(6) 0.0019(6) 0.0083(6) N1 0.0223(7) 0.0261(7) 0.0273(7) 0.0008(5) 0.0001(5) 0.0101(5) N2 0.0210(7) 0.0234(6) 0.0248(7) 0.0009(5) -0.0003(5) 0.0092(5) N3 0.0218(7) 0.0277(7) 0.0246(7) -0.0019(5) 0.0003(5) 0.0106(5) N4 0.0223(7) 0.0226(6) 0.0237(7) -0.0006(5) 0.0004(5) 0.0103(5) N5 0.0233(7) 0.0343(7) 0.0284(8) -0.0065(6) -0.0042(5) 0.0145(6) N6 0.0217(6) 0.0296(7) 0.0291(7) -0.0060(5) -0.0017(5) 0.0139(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 O2 H2 109.5 ? O1 C1 O2 122.91(14) y O1 C1 C2 123.08(15) y O2 C1 C2 114.01(13) y C1 C2 C3 115.24(14) y C1 C2 H2A 108.5 ? C3 C2 H2A 108.5 ? C1 C2 H2B 108.5 ? C3 C2 H2B 108.5 ? H2A C2 H2B 107.5 ? C2 C3 C4 112.59(14) y C2 C3 H3A 109.1 ? C4 C3 H3A 109.1 ? C2 C3 H3B 109.1 ? C4 C3 H3B 109.1 ? H3A C3 H3B 107.8 ? C5 C4 C3 112.24(14) y C5 C4 H4A 109.2 ? C3 C4 H4A 109.2 ? C5 C4 H4B 109.2 ? C3 C4 H4B 109.2 ? H4A C4 H4B 107.9 ? C4 C5 C6 113.66(14) y C4 C5 H5A 108.8 ? C6 C5 H5A 108.8 ? C4 C5 H5B 108.8 ? C6 C5 H5B 108.8 ? H5A C5 H5B 107.7 ? C7 C6 C5 113.48(15) y C7 C6 H6A 108.9 ? C5 C6 H6A 108.9 ? C7 C6 H6B 108.9 ? C5 C6 H6B 108.9 ? H6A C6 H6B 107.7 ? C6 C7 C8 112.67(16) y C6 C7 H7A 109.1 ? C8 C7 H7A 109.1 ? C6 C7 H7B 109.1 ? C8 C7 H7B 109.1 ? H7A C7 H7B 107.8 ? C7 C8 H8A 109.5 ? C7 C8 H8B 109.5 ? H8A C8 H8B 109.5 ? C7 C8 H8C 109.5 ? H8A C8 H8C 109.5 ? H8B C8 H8C 109.5 ? N1 C9 C10 123.77(15) y N1 C9 H9 118.1 ? C10 C9 H9 118.1 ? C11 C10 C9 118.30(15) y C11 C10 H10 120.8 ? C9 C10 H10 120.8 ? C10 C11 C12 118.69(14) y C10 C11 H11 120.7 ? C12 C11 H11 120.7 ? C11 C12 C13 119.00(14) y C11 C12 H12 120.5 ? C13 C12 H12 120.5 ? N1 C13 C12 122.73(14) y N1 C13 C14 116.61(13) y C12 C13 C14 120.65(14) y N4 C14 N2 126.64(14) y N4 C14 C13 116.42(13) y N2 C14 C13 116.93(13) y N5 C15 N3 117.06(13) y N5 C15 N2 119.08(13) y N3 C15 N2 123.86(14) y N6 C16 N3 117.82(13) y N6 C16 N4 118.16(13) y N3 C16 N4 124.02(13) y C9 N1 C13 117.51(13) y C14 N2 C15 114.41(13) y C16 N3 C15 116.52(13) y C14 N4 C16 114.54(13) y C15 N5 H5C 120.0 ? C15 N5 H5D 120.0 ? H5C N5 H5D 120.0 ? C16 N6 H6C 120.0 ? C16 N6 H6D 120.0 ? H6C N6 H6D 120.0 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 1.217(2) y O2 C1 1.307(2) y O2 H2 0.8400 ? C1 C2 1.516(2) y C2 C3 1.523(2) y C2 H2A 0.9900 ? C2 H2B 0.9900 ? C3 C4 1.529(2) y C3 H3A 0.9900 ? C3 H3B 0.9900 ? C4 C5 1.522(2) y C4 H4A 0.9900 ? C4 H4B 0.9900 ? C5 C6 1.531(2) y C5 H5A 0.9900 ? C5 H5B 0.9900 ? C6 C7 1.521(2) y C6 H6A 0.9900 ? C6 H6B 0.9900 ? C7 C8 1.523(2) y C7 H7A 0.9900 ? C7 H7B 0.9900 ? C8 H8A 0.9800 ? C8 H8B 0.9800 ? C8 H8C 0.9800 ? C9 N1 1.334(2) y C9 C10 1.392(2) y C9 H9 0.9500 ? C10 C11 1.383(2) y C10 H10 0.9500 ? C11 C12 1.390(2) y C11 H11 0.9500 ? C12 C13 1.390(2) y C12 H12 0.9500 ? C13 N1 1.343(2) y C13 C14 1.502(2) y C14 N4 1.3342(19) y C14 N2 1.336(2) y C15 N5 1.325(2) y C15 N3 1.3434(19) y C15 N2 1.361(2) y C16 N6 1.3272(19) y C16 N3 1.339(2) y C16 N4 1.3583(19) y N5 H5C 0.8800 ? N5 H5D 0.8800 ? N6 H6C 0.8800 ? N6 H6D 0.8800 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O2 H2 N3 0.84 1.8 2.6220(17) 166.7 . N5 H5C O1 0.88 2.23 3.0795(18) 163.4 . N5 H5D N2 0.88 2.2 3.0569(19) 165.6 2_587 N6 H6C O2 0.88 2.52 3.1866(18) 133.2 . N6 H6D N4 0.88 2.04 2.9172(19) 173.1 2_576